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Foundation Model for Cancer Imaging Biomarkers
preprocessing
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AIM-Harvard/foundation-cancer-image-biomarker
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Getting Started
Replication Guide
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API Reference
Foundation Model for Cancer Imaging Biomarkers
AIM-Harvard/foundation-cancer-image-biomarker
Home
Getting Started
Getting Started
Installation
Cloud Quick Start
Quick Start
Replication Guide
Replication Guide
Data Download and Preprocessing
Pre-training the FM
Adapt the FM to downstream tasks
Baselines for downstream tasks
Extracting Features & Predictions
Reproduce Analysis
Tutorials
API Reference
API Reference
fmcib
fmcib
run
callbacks
callbacks
utils
prediction_saver
datasets
datasets
ssl_radiomics_dataset
utils
optimizers
optimizers
lars
models
models
load_model
models_genesis
autoencoder
utils
utils
download_utils
idc_helper
ssl
ssl
losses
losses
ntxent_mined_loss
ntxent_loss
neg_mining_info_nce_loss
swav_loss
nnclr_loss
modules
modules
exneg_simclr
swav
simclr
nnclr
transforms
transforms
multicrop
duplicate
med3d
random_resized_crop
visualization
visualization
verify_io
preprocessing
preprocessing
seed_based_crop
Table of contents
preprocessing
preprocessing