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Foundation Model for Cancer Imaging Biomarkers
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AIM-Harvard/foundation-cancer-image-biomarker
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Foundation Model for Cancer Imaging Biomarkers
AIM-Harvard/foundation-cancer-image-biomarker
Home
Getting Started
Getting Started
Installation
Cloud Quick Start
Quick Start
Replication Guide
Replication Guide
Data Download and Preprocessing
Pre-training the FM
Adapt the FM to downstream tasks
Baselines for downstream tasks
Extracting Features & Predictions
Reproduce Analysis
Tutorials
API Reference
API Reference
fmcib
fmcib
run
models
models
models_genesis
load_model
autoencoder
callbacks
callbacks
utils
prediction_saver
visualization
visualization
verify_io
preprocessing
preprocessing
seed_based_crop
optimizers
optimizers
lars
datasets
datasets
utils
ssl_radiomics_dataset
transforms
transforms
random_resized_crop
med3d
multicrop
duplicate
ssl
ssl
modules
modules
swav
nnclr
simclr
exneg_simclr
losses
losses
nnclr_loss
ntxent_mined_loss
neg_mining_info_nce_loss
swav_loss
ntxent_loss
utils
utils
idc_helper
download_utils
Table of contents
callbacks
callbacks